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cellprofilertm-software version 4.2.1 (Broad Institute Inc)

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Broad Institute Inc cellprofilertm-software version 4.2.1
Cellprofilertm Software Version 4.2.1, supplied by Broad Institute Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/cellprofilertm/cellprofilertm+software/pm39477958-253-13-16
Average 90 stars, based on 1 article reviews

cellprofilertm-software version 4.2.1 - by Bioz Stars, 2026-10

90/100 stars

Images

other:

Article Title: Characterisation and evaluation of the regenerative capacity of Stro-4+ enriched bone marrow mesenchymal stromal cells using bovine extracellular matrix hydrogel and a novel biocompatible melt electro-written medical-grade polycaprolactone scaffold
Article Snippet: As previously stated cell culture media was switched to chondrogenic or osteogenic as appropriate and culture extended to 14 days with media changed every 72 h. Cells were fixed and stained with Alcian Blue (chondrogenic differentiation) and Alizarin Red (osteogenic differentiation) as previously stated and quantified for staining intensity following an automated pipeline using an open source image analysis software (CellProfilerTM, The Broad Institute, USA).

Article Title: Inhibition of Ovarian Cancer Cell Spheroid Formation by Synthetic Peptides Derived from Nectin-4
Article Snippet: A simple four-step CellProfilerTM (open source, Broad Institute, www.cellprofiler.org ) pipeline was used to delineate the biologically relevant image contents and to quantify the area of spheroids over time.

Staining:

Article Title: Beneficial effects of β-escin on muscle regeneration in rat model of skeletal muscle injury.
Article Snippet: .. To measure the cross section area of muscle fibers (CSA) and to assess the location of the nuclei in muscle fibers, six fields of view randomly selected from the images of the entire section stained with Gomori trichrome or hematoxylin and eosin, respectively, were analyzed with the CellProfilerTM (Broad Institute). ..

Article Title: The microtubule inhibitor eribulin demonstrates efficacy in platinum-resistant and refractory high-grade serous ovarian cancer patient-derived xenograft models
Article Snippet: High-definition images were uploaded into CaseCenter (3DHISTECH Ltd.) and images were processed using FIJI image analysis software. .. Ki-67 staining was quantified using CellProfilerTM (Broad Institute) in 4–6 fields of view for three independent tumours of each PDX model (i.e. 11–18 total fields of view per PDX model). .. Targeted sequencing using the Foundation Medicine T5a panel, which sequences 287 cancer-related genes, was carried out on seven PRR PDX tumours (#201, #29, #148, #13, #111, #931 and #169) and #183.

Fluorescence:

Article Title: A Dual Strategy—In Vitro and In Silico—To Evaluate Human Antitetanus mAbs Addressing Their Potential Protective Action on TeNT Endocytosis in Primary Rat Neuronal Cells
Article Snippet: The images were captured using a Confocal Microscope Leica TCS SP8. .. Version 4.2.5 of CellProfilerTM (Broad Institute—Cambridge, MA, USA) was used to quantify the number of punctas and fluorescence intensity of the toxin and evaluate the correlation between the toxin and SV protein using Pearson’s coefficient. .. The statistical analyses were performed with GraphPad Prism Software (version 8.2.1.